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Enhancing Cancer Diagnostics with CRISPR-Cas Technology

Aug 11, 2023, 18:16 PM by Arnaud Legrand
This study introduces a new method that combines CRISPR-Cas gene-editing technology and molecular barcoding for improved cancer detection. By stabilising DNA to act as molecular barcodes, researchers triggered diagnostic signals in response to disease-related changes. CRISPR nucleases were then employed to detect these signals, offering a specific readout for diagnostics. This approach could lead to non-invasive and rapid cancer detection, showcasing the potential of converging scientific fields for significant healthcare advancements.

 


A recent scientific paper titled "CRISPR-Cas-amplified urinary biomarkers for multiplexed and portable cancer diagnostics" presents a significant advancement in cancer detection using a combination of CRISPR-Cas technology and molecular barcoding. The study, authored by researchers including Liangliang Hao and Sangeeta N. Bhatia, introduces a novel approach that could revolutionise the field of cancer diagnostics.

 

Traditionally, biomarkers have played a crucial role in diagnosing complex diseases like cancer. However, limitations in existing biomarker technologies have led to the development of synthetic biomarkers, which are engineered to amplify molecular signals associated with disease. A key challenge in this field has been the vulnerability of nucleic acids, the building blocks of DNA, to degradation within the body. The study addresses this challenge by leveraging the power of CRISPR-Cas technology, a gene-editing tool. The researchers used CRISPR nucleases to detect diagnostic signals generated by synthetic biomarkers. This involves stabilising nucleic acids to act as molecular barcodes that are released in response to disease-associated protease activity. These barcodes are then detected using CRISPR nucleases, offering a specific readout that can be used for diagnostics.

 

What sets this approach apart is its potential impact. By targeting disease sites and utilizing CRISPR-Cas technology, the researchers have created a panel of DNA-encoded synthetic urine biomarkers (DNA-SUBs) capable of detecting and distinguishing disease states. These DNA-SUBs are capable of surviving circulation and are concentrated in the kidneys, allowing for easy detection in urine. The study demonstrated the potential for non-invasive disease detection and monitoring using DNA-SUBs in murine cancer models. Furthermore, the researchers have translated this diagnostic readout into a point-of-care (PoC) paper diagnostic tool, which could potentially enable rapid and cost-effective diagnostics in various settings. Additionally, a microfluidic platform was used for densely multiplexed DNA barcode readouts, opening up possibilities for evaluating complex human diseases rapidly and guiding treatment decisions.

 

In conclusion, the study offers a significant step forward in cancer diagnostics by combining CRISPR-Cas technology with synthetic biomarkers. This interdisciplinary approach holds promise for early disease detection and personalised treatment, showcasing the potential of converging scientific fields for transformative advancements in healthcare.

 

Liangliang Hao, Renee T. Zhao, Nicole L. Welch, Edward Kah Wei Tan, Qian Zhong, Nour Saida Harzallah, Chayanon Ngambenjawong, Henry Ko, Heather E. Fleming, Pardis C. Sabeti & Sangeeta N. Bhatia 
Nature Nanotechnology volume 18, pages798–807 (2023)

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Enhancing Cancer Diagnostics with CRISPR-Cas Technology

Aug 11, 2023, 18:16 PM by Arnaud Legrand
This study introduces a new method that combines CRISPR-Cas gene-editing technology and molecular barcoding for improved cancer detection. By stabilising DNA to act as molecular barcodes, researchers triggered diagnostic signals in response to disease-related changes. CRISPR nucleases were then employed to detect these signals, offering a specific readout for diagnostics. This approach could lead to non-invasive and rapid cancer detection, showcasing the potential of converging scientific fields for significant healthcare advancements.

 


A recent scientific paper titled "CRISPR-Cas-amplified urinary biomarkers for multiplexed and portable cancer diagnostics" presents a significant advancement in cancer detection using a combination of CRISPR-Cas technology and molecular barcoding. The study, authored by researchers including Liangliang Hao and Sangeeta N. Bhatia, introduces a novel approach that could revolutionise the field of cancer diagnostics.

 

Traditionally, biomarkers have played a crucial role in diagnosing complex diseases like cancer. However, limitations in existing biomarker technologies have led to the development of synthetic biomarkers, which are engineered to amplify molecular signals associated with disease. A key challenge in this field has been the vulnerability of nucleic acids, the building blocks of DNA, to degradation within the body. The study addresses this challenge by leveraging the power of CRISPR-Cas technology, a gene-editing tool. The researchers used CRISPR nucleases to detect diagnostic signals generated by synthetic biomarkers. This involves stabilising nucleic acids to act as molecular barcodes that are released in response to disease-associated protease activity. These barcodes are then detected using CRISPR nucleases, offering a specific readout that can be used for diagnostics.

 

What sets this approach apart is its potential impact. By targeting disease sites and utilizing CRISPR-Cas technology, the researchers have created a panel of DNA-encoded synthetic urine biomarkers (DNA-SUBs) capable of detecting and distinguishing disease states. These DNA-SUBs are capable of surviving circulation and are concentrated in the kidneys, allowing for easy detection in urine. The study demonstrated the potential for non-invasive disease detection and monitoring using DNA-SUBs in murine cancer models. Furthermore, the researchers have translated this diagnostic readout into a point-of-care (PoC) paper diagnostic tool, which could potentially enable rapid and cost-effective diagnostics in various settings. Additionally, a microfluidic platform was used for densely multiplexed DNA barcode readouts, opening up possibilities for evaluating complex human diseases rapidly and guiding treatment decisions.

 

In conclusion, the study offers a significant step forward in cancer diagnostics by combining CRISPR-Cas technology with synthetic biomarkers. This interdisciplinary approach holds promise for early disease detection and personalised treatment, showcasing the potential of converging scientific fields for transformative advancements in healthcare.

 

Liangliang Hao, Renee T. Zhao, Nicole L. Welch, Edward Kah Wei Tan, Qian Zhong, Nour Saida Harzallah, Chayanon Ngambenjawong, Henry Ko, Heather E. Fleming, Pardis C. Sabeti & Sangeeta N. Bhatia 
Nature Nanotechnology volume 18, pages798–807 (2023)

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